Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797230.1_cds_XP_016454233.1_4786
CDS Infomation

[gene=LOC107778480] [db_xref=GeneID:107778480] [protein=F-box/LRR-repeat protein 17-like] [protein_id=XP_016454233.1] [location=complement(join(630..695,862..960,1282..1367,1459..1525,1600..1820,1917..2014,2446..2550,2677..2861,2969..3113,4185..4286,4454..5061))] [gbkey=CDS]
Sequence

ATGCAAATCCCCCATCCCCACCCCTCCACCCCCATCTCCGACGCCTTCGTCCACAAGCGC
GGTAAAAAACGCGGTAGCTACAACTGCGGCCGATGTGGGCAACCCAAAAAAGGCCACGTT
TGCCATATCTCTAACGACCTTAATAATCATACAGATGTTCCTACTCCCACACCGACCGAT
GCCAAATCATTTGTTCTCCCTTCTCCGCTATCCGTTATTCGTCCTCAGCAACTTCCACCT
CCGCCACGTCAGCCACTTCCCCAGCTCCGGCGAGCGCTTTCTTTCGATGACGTGGATGTC
AGCGATGATGAGTCGCCTGTATCTGATGATGATGACGTGGATTGTTTGGATCTGGAGAGT
GAGTTGGATTTAGGTGGGTCCGGGAAGTTACCCGCGAGTGCTTTGTGGGAAGTGCTTAAG
AGATTGCCTCCATCAGCGCTGCTTTCTGCGGCGAAGGTGTGTAAGGGTTGGAGGGATGTT
TCTAGAAGGATCTGGAAGTCGGCTGAGGAGCTAAGGCTTGGAGTTCCTGTGAAAGCTCAG
ATTGGGCTTGTTGGATCAGTGTTGCAGAAATGCCCTGGACTTGTTAAGCTTTCACTTAGA
ATGGAAAGTGATGTGGACGCAACGATGCTGGCTTGCATTGCATTTTCCTGCCCTAATCTG
GATTCAATGGAGATCCTTACTTCAGATACCTCAGTTAATCGGATCACAGGGGATGAATTA
GGCCGTTTTGTTGCTGACAGAAGGTGCCTTACCAATCTCAAGATGGAAGGCTGCTCAAAT
CTTGGGGCCTTTACTCTTTCTTCAACCAGCCTTTCCACTCTTTGCCTTTCGGATCTCTTT
TGTCACTCTAAGATGGTCTTCAACTGCCCCAATTTAAAGGAGATTTCCCTGGATTTTTCT
CGCCAAGAGAAGGATAGCACTGATCTTACTGCTATGGTAGATGGTCTTGGAAGGAGCTGC
CCAAGACTACAGAACATTCATGTTGCATCTGTTCGGCTTACACATGCTGTTGTGCTTGCT
CTAACAGCAGCAAATTTAAGGGGATTACGAATGCTTTCCCTAGTACTAGGGTCAGAAATA
ACTGATGCATCTGTCGCTGCTATTGCATCGAGCTACTCGAGGCTTGAGTTACTTGATTTG
AGTGGGTCAAGTATTAGTGACAGTGGCATTGGGATGATATGCAATATATTTCCAGAGACA
TTGTCTAAACTTCTCCTTGCTCTTTGTCCAAATATCACTTCAAGTGGCATTCAATTTGCT
GCAGCTCAGTTGCCTAATCTAGAGATAATGGACTGTGGAATGACCATATGTGATCCAGAT
TTAGACAGTCCAACAACTCAGGAAAATGATAACGGCGAATTACAAAGAACACCGATTAGT
AAATTACACCTTATATATCAGAAACTGATTATCAAACACAACCGCTTAAAGAAACTCAGC
TTGTGGGGTTGCTCTGGCTTAGATGCATTATATCTAAATTGCCCAGAGCTTAATGATTTG
AACCTGAACTCCTGTACAAACTTGAATCCAGAAAGATTGCTACTTCAATGCCCCAATCTG
GAAAGTGTGCATGCATCATGCTGTCAAGACACATTGGTTGAAACTCTTCAGAATCAGGTT
TGTGGTGATTTTATGGCTGGAGACAATCATTTTCCATCCAAACGTCTTCCTGATGGCTCA
AAAAGGATCAGAGTTCCTCATTTATTCAGCCCCCAGCCATTTGATGATGAGAAGAGAAAG
AGAAGGATTTCAAAGCGACGGTGCGCGGTGCTTGTTTATTAG

Peptide Sequence

PEP ID

XP_016454233.1
PEP Infomation

PREDICTED: F-box/LRR-repeat protein 17-like [Nicotiana tabacum]
Sequence

MQIPHPHPSTPISDAFVHKRGKKRGSYNCGRCGQPKKGHVCHISNDLNNHTDVPTPTPTD
AKSFVLPSPLSVIRPQQLPPPPRQPLPQLRRALSFDDVDVSDDESPVSDDDDVDCLDLES
ELDLGGSGKLPASALWEVLKRLPPSALLSAAKVCKGWRDVSRRIWKSAEELRLGVPVKAQ
IGLVGSVLQKCPGLVKLSLRMESDVDATMLACIAFSCPNLDSMEILTSDTSVNRITGDEL
GRFVADRRCLTNLKMEGCSNLGAFTLSSTSLSTLCLSDLFCHSKMVFNCPNLKEISLDFS
RQEKDSTDLTAMVDGLGRSCPRLQNIHVASVRLTHAVVLALTAANLRGLRMLSLVLGSEI
TDASVAAIASSYSRLELLDLSGSSISDSGIGMICNIFPETLSKLLLALCPNITSSGIQFA
AAQLPNLEIMDCGMTICDPDLDSPTTQENDNGELQRTPISKLHLIYQKLIIKHNRLKKLS
LWGCSGLDALYLNCPELNDLNLNSCTNLNPERLLLQCPNLESVHASCCQDTLVETLQNQV
CGDFMAGDNHFPSKRLPDGSKRIRVPHLFSPQPFDDEKRKRRISKRRCAVLVY

Transcript Sequence

Gene sequence data has not been registered.